2020欧洲杯谁能夺冠

Advertisement

Bioinformatics for Cancer Immunotherapy

Methods and Protocols

  • Sebastian Boegel
Book

Part of the Methods in Molecular Biology book series (MIMB, volume 2120)

Table of contents

  1. Front Matter
    Pages i-xii
  2. Christoph Holtsträter, Barbara Schrörs, Thomas Bukur, Martin Löwer
    Pages 1-9
  3. Minghao Li, Ting He, Chen Cao, Quan Long
    Pages 11-36
  4. Weitai Huang, Yu Amanda Guo, Mei Mei Chang, Anders Jacobsen Skanderup
    Pages 37-46
  5. Rose Orenbuch, Ioan Filip, Raul Rabadan
    Pages 71-92
  6. Vitor R. C. Aguiar, Cibele Masotti, Anamaria A. Camargo, Diogo Meyer
    Pages 101-112
  7. Timothy O’Donnell, Alex Rubinsteyn
    Pages 113-127
  8. Alexander Kirchmair, Francesca Finotello
    Pages 129-145
  9. Prathyusha Konda, J. Patrick Murphy, Shashi Gujar
    Pages 161-171
  10. Wenguang Shao, Etienne Caron, Patrick Pedrioli, Ruedi Aebersold
    Pages 173-181
  11. Sofie Gielis, Pieter Moris, Wout Bittremieux, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens et al.
    Pages 183-195
  12. Ragul Gowthaman, Brian G. Pierce
    Pages 197-212
  13. Gregor Sturm, Francesca Finotello, Markus List
    Pages 213-222
  14. Masaki Suimye Morioka, Hideya Kawaji, Hiromi Nishiyori-Sueki, Mitsuyoshi Murata, Miki Kojima-Ishiyama, Piero Carninci et al.
    Pages 277-301
  15. Back Matter
    Pages 303-304

About this book

Introduction

This volume focuses on a variety of in silico protocols of the latest bioinformatics tools and computational pipelines developed for neo-antigen identification and immune cell analysis from high-throughput sequencing data for cancer immunotherapy. The chapters in this book cover topics that discuss the two emerging concepts in recognition of tumor cells using endogenous T cells: cancer vaccines against neo-antigens presented on HLA class I and II alleles, and checkpoint inhibitors. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Cutting-edge and authoritative, Bioinformatics for Cancer Immunotherapy: Methods and Protocols is a valuable research tool for any scientist and researcher interested in learning more about this exciting and developing field.

Keywords

Mutation detection VarScan 2 multiSNV SomaticSeq ExScalibur VariantMetaCaller MHC Binding Affinity Prediction HLA class CD8+ Epitopes

Editors and affiliations

  • Sebastian Boegel
    • 1
  1. 1.MainzGermany

Bibliographic information

  • DOI http://doi.org/10.1007/978-1-0716-0327-7
  • Copyright Information Springer Science+Business Media, LLC, part of Springer Nature 2020
  • Publisher Name Humana, New York, NY
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-0716-0326-0
  • Online ISBN 978-1-0716-0327-7
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site